Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015906317.1_cds_XP_016456507.1_50334
CDS Infomation

[gene=LOC107780470] [db_xref=GeneID:107780470] [protein=protein NUCLEAR FUSION DEFECTIVE 4-like] [protein_id=XP_016456507.1] [location=complement(join(27888..28353,29458..30341,31691..32014))] [gbkey=CDS]
Sequence

ATGGTGAACATTAAAGGAGGAACAAGACCACCATGGGTAGGATTAGGAGCTGCAGTTTGG
TTACAAATAGCTTCTGGAAATGCATATAATTTCCCCCTTTATTCTCATTCGTTAAAATCA
GTTCTTGGTTTTAATCAACAGCAGCTTACTATGCTTGGAGTTGCAAATGATATAGGAGAG
AATGTTGGACTTATTCCTGGACTTGTTTGTAATAAGTTCCCACCTTGGGTTGTTCTTTTA
ATTGGTTCTTTCGCCTGTTTCTTTGGTTATGGTGTTCTTTGGCTTGCACTTAGTCAAACT
GTTCAGAACTTGCCTTATTGGCTGTTATGGATTGCACTTTGTGTTGCCACGAATAGCAGT
GCTTGGTTCAGCACAACTGTGCTTGTGACTAATATGAGAAACTTTCCTCTAAGCCGGGGC
ACTGTTGCTGGGGTTCTTAAAGGCTACGGAGGGCTAAGCGCTGCAGTGTATACGGAAGTC
TACAGTGCATTGCTTCGCAATTCTTCTTCTAAGCTCTTGCTCTTCCTTGCACTAGGGGTT
CCTACGCTAAGTTTATTGATGATGTACTTTATTAGGCCTTGTACTCCATCTTTAGGCGAT
GATTCTGCAGAGTCATACCACTTTTTGTTTGTTCAAGTAGCTAGCATTGTGCTCGGTGTC
TATGTATTAACAACAACAATTTTGGAAGATATATTTTCTTTAAATGTCCTTGTTTCTTAT
ACTTTTCTCGTTATCATGGTGCTCCTTCTAATGGCTCCACTAGCCATTCCTTTGAAGATG
ACCTTTTACCCCTCAAACCGCGGCAAGATGACCGATGTATCAGACCAAGACAATGTCAGT
GCAGATAAATCACAACCCTTGTTAACACCATCATCGTCATCAGCAAACCTAGGAAGCTTT
AACGAGGGAGACGAAATCTCCGAAGTGGATATGCTTCTGGCTGAAGGGGAAGGTGCGGTG
AAGAAAAAGAGGAGGCCAAGAAGAGGCGAAGATTTCAAGTTCAAAGAAGCTTTGGTCAAA
GCAGATTTCTGGCTTTTGTTTTTGGTTTACTTTTTTGGTGTGGGTTCTGGAGTTACCGTT
CTTAATAATCTAGCACAGATTGGAATAGCTCAAGGTCTTCATGATACAAAGATTCTGTTA
TCCCTCTTCAGTTTCTGCAACTTCGTGGGTCGTCTTGGTGGAGGAGTTGTATCAGAATAT
TTTGTCAGGTTAAAAGCAGTACCTAGAACAGTTTGGATGACATGCACACAAGTAGTAATG
ATCATTACCTACCTTCTGTTTGCGTCTGCACTTAATGGTACCTTGTATGCAGCGACAGCG
TTACTAGGAGTCTGCTACGGTGTTCAATTTACAACAATGGTCCCAACAGCTTCTGAGCTT
TTTGGTCTCAAGCATTTCGGTATGATTTTCAATTTCATGTCCCTGGGGAATCCTTTAGGT
GCTTATCTCTTTTCCGGTCTCCTTGCCGGATTTCTCTACGATAACGAGGCAGCAAAGCAG
CACTCTGCTACTTGCTTGGGTCCTAATTGCTTTAGAGTCACCTTCCTGATTCTCGCTGGA
GTATGTGGTATCGGCACCATGCCTAGTATTGTTCTTACCATGAGAATAAAACCTGTTTAC
CAAATGCTTTATGCTGGAGGTTCCTTTCGGCTACCTCAAAATTCAAATCATTGA

Peptide Sequence

PEP ID

XP_016456507.1
PEP Infomation

PREDICTED: protein NUCLEAR FUSION DEFECTIVE 4-like [Nicotiana tabacum]
Sequence

MVNIKGGTRPPWVGLGAAVWLQIASGNAYNFPLYSHSLKSVLGFNQQQLTMLGVANDIGE
NVGLIPGLVCNKFPPWVVLLIGSFACFFGYGVLWLALSQTVQNLPYWLLWIALCVATNSS
AWFSTTVLVTNMRNFPLSRGTVAGVLKGYGGLSAAVYTEVYSALLRNSSSKLLLFLALGV
PTLSLLMMYFIRPCTPSLGDDSAESYHFLFVQVASIVLGVYVLTTTILEDIFSLNVLVSY
TFLVIMVLLLMAPLAIPLKMTFYPSNRGKMTDVSDQDNVSADKSQPLLTPSSSSANLGSF
NEGDEISEVDMLLAEGEGAVKKKRRPRRGEDFKFKEALVKADFWLLFLVYFFGVGSGVTV
LNNLAQIGIAQGLHDTKILLSLFSFCNFVGRLGGGVVSEYFVRLKAVPRTVWMTCTQVVM
IITYLLFASALNGTLYAATALLGVCYGVQFTTMVPTASELFGLKHFGMIFNFMSLGNPLG
AYLFSGLLAGFLYDNEAAKQHSATCLGPNCFRVTFLILAGVCGIGTMPSIVLTMRIKPVY
QMLYAGGSFRLPQNSNH

Transcript Sequence

Gene sequence data has not been registered.